Cultured Guru Logo
Cultured Guru Logo
  • Start Here
  • RecipesWe love to create delicious recipes with gut health in mind. By using our recipes, you can easily create any dish knowing that it’s good for gut health! Our recipe blog also includes Vegan Recipes, Vegetarian Recipes, Gluten Free Recipes, and Paleo Recipes.
  • About
  • Learn
  • Shop
  • Contact
  • Start Here
  • RecipesWe love to create delicious recipes with gut health in mind. By using our recipes, you can easily create any dish knowing that it’s good for gut health! Our recipe blog also includes Vegan Recipes, Vegetarian Recipes, Gluten Free Recipes, and Paleo Recipes.
  • About
  • Learn
  • Shop
  • Contact
Sourdough Discard Muffins

Whole Wheat Apple Carrot Muffins with Sourdough Discard

Moist, rich, and bursting with flavor—the perfect baking recipe for apple season. Enjoy these sourdough apple carrot muffins for breakfast, a snack, or dessert.

Prep: 10 minutes
Cook: 30 minutes
Total: 40 minutes
Jump to Recipe Rate Recipe
Recipe Index | Ferment | Sourdough Discard | Sourdough Discard Muffins

Whole Wheat Apple Carrot Muffins with Sourdough Discard

Moist, rich, and bursting with flavor—the perfect baking recipe for apple season. Enjoy these sourdough apple carrot muffins for breakfast, a snack, or dessert.

Whole Wheat Apple Carrot Muffins

If you love baking with sourdough starter and are looking for a creative way to use your sourdough discard during apple season this fall, we have a delightful treat for you—Whole Wheat Apple Carrot Muffins with Sourdough Discard!

These muffins are packed with fresh, crisp apples, sweet grated carrots, and warm cinnamon, creating a nutritious and delicious snack that’s perfect anytime.

Whole Wheat Apple Carrot Muffins with Sourdough Discard

Sourdough is a beloved ingredient in bread-making and offers numerous health benefits. The fermentation process used to create sourdough bread enhances its nutritional profile, making it easier to digest than traditional yeast bread. In sourdough, lactic acid bacteria break down gluten, fructans, and phytic acid, which can benefit individuals with gluten or FODMAP sensitivities.

While muffins are not usually long-fermented, they can be! Though I don’t long ferment these apple carrot muffins, some readers have told me they’ve had success fermenting the batter overnight in the fridge for improved digestibility. Feel free to try fermenting the muffin batter overnight in the refrigerator before preheating your oven and filling your muffin tin with batter.

Don’t Over-Mix These Apple Carrot Muffins

One crucial tip when making these apple carrot muffins is to avoid overmixing the batter. Overmixing can result in dense muffins, primarily due to gluten formation, rather than the light and fluffy texture we want.

Gluten, a protein present in flour, gives structure to baked goods. However, excessive mixing develops gluten strands, leading to a denser texture. To prevent this, gently mix the dry and wet ingredients until combined, ensuring there are still some lumps and streaks of flour in the batter.

This technique raises the muffins correctly, resulting in a tender crumb. Another helpful tip is to use a thin aluminum muffin tin with paper liners. For even baking, a metal muffin tin works much better than a silicone muffin pan.

Hands use a knife to chop apples for the apple carrot muffin recipe.
The dry ingredient mixture is in a bowl for apple carrot muffins.

Why Are My Apple Carrot Muffins Dry?

Dry muffins can result from several factors related to ingredients and baking techniques. Here are some common reasons and tips to help you troubleshoot:

  1. Too Much Flour: Adding too much flour can make muffins dry. For accuracy, measure your flour correctly using the spoon-and-level method.
  2. Overmixing: Overmixing the batter can cause too much gluten to develop, making the muffins dense and dry. Mix until just combined to avoid this.
  3. Baking Time: Baking muffins for too long can cause them to dry out. Check them a few minutes before the recipe’s suggested time by inserting a toothpick; it should come out clean but not dry.
  4. Moisture Balance: The combination of apples and carrots helps retain moisture. If your muffins are dry, use enough fresh, juicy apples and carrots to achieve the right balance.
  5. Low-Fat Content: If your recipe uses low-fat ingredients or substitutes, the muffins may lack moisture. My recipe calls for butter, which helps keep the muffins from drying.
The wet ingredient mixture for apple carrot muffins in a white bowl.
The wet and dry ingredients are mixed into a bowl to make the apple carrot muffins batter.

What is the Secret to Moist Muffins?

Adding fruit and vegetables to muffins is the secret to achieving a moist and tender texture that keeps these baked treats irresistibly soft.

Fruits like apples and vegetables like carrots naturally contain high water content, which releases moisture as the muffins bake. This moisture infusion prevents the muffins from drying out and enhances their softness. Moreover, fruits contribute to the flavor profile, adding a fresh, natural sweetness that complements the other ingredients.

The natural sugars in apples caramelize during baking, creating pockets of juicy, flavorful bites within the muffin. The pectin in apples is a natural thickener, contributing to the moist, luscious crumb. Incorporating fruit and vegetables elevates the taste and ensures that each muffin is tender and moist.

Hands use a spoon to fill a muffin tin with batter.

Storing Sourdough Apple Muffins

Properly storing baked apple carrot muffins ensures they remain fresh and delicious. Here are some tips on how to store them effectively:

  • Room Temperature Storage:
    • Allow the muffins to cool completely.
    • Place them in an airtight container lined with paper towels to absorb excess moisture.
    • Store at room temperature for up to 3-4 days.
  • Refrigeration:
    • If the weather is hot or humid, consider refrigerating the muffins.
    • Wrap each muffin individually in plastic wrap to prevent drying out.
    • Store in an airtight container in the fridge for up to one week.
  • Freezing Muffins:
    • Cool the muffins completely before freezing.
    • Place wrapped muffins in a freezer-safe bag or container.
    • Label it with the date and freeze it for up to 3 months.
  • Reheating Frozen Muffins:
    • Remove the desired number of muffins from the freezer.
    • Microwave on high for 20-30 seconds or until warm.
    • Alternatively, preheat the oven to 350°F (175°C) and heat the muffins for 10-15 minutes until warmed.

Following these tips, your Whole Wheat Apple Carrot Muffins with Sourdough Discard will stay deliciously fresh, ready for breakfast, snacks, or whenever you need a healthy, satisfying treat!

More Muffin Recipes

  • Low-Sugar Blueberry Protein Muffins with Sourdough Discard
  • Zucchini Blueberry Muffins with Sourdough Discard
  • Double Chocolate Cherry Muffins with Sourdough Discard
Print
Sourdough Discard Muffins

5 Stars 4 Stars 3 Stars 2 Stars 1 Star

5 from 1 review

Whole Wheat Apple Carrot Muffins with Sourdough Discard

A festive fall snack that uses up some sourdough discard? Sign us up! Moist, rich, and bursting with flavor—the perfect baking recipe for fall and apple season. Enjoy these sourdough apple carrot muffins for breakfast, a snack, or dessert.

  • Prep: 10 minutes
  • Cook: 30 minutes
  • Total Time: 40 minutes

Ingredients

  • 1 cup whole wheat flour
  • 1 1/4 cups all purpose flour
  • 1/2 cup brown sugar, packed
  • 1/2 teaspoon baking soda
  • 1 teaspoon baking powder
  • 1 teaspoon salt
  • 1 teaspoon cinnamon
  • 1 cup apples, chopped
  • 1 cup shredded carrots
  • 1/2 cup grass-fed butter, room temperature soft/melted
  • 1/2 cup sourdough starter, room temperature
  • 2 teaspoons vanilla extract
  • 1/2 cup whole milk, room temperature
  • 2 eggs, room temperature

Icing Drizzle

  • 1/3 cup powdered sugar
  • 2–3 teaspoons whole milk

Instructions

  • Preheat your oven to 350° F.
  • Line a muffin tin with paper liners.
  • Chop/mince the apples and carrots.
  • In a medium-large mixing bowl, combine the flour, sugar, cinnamon, baking soda, baking powder, salt, apples and carrots.
  • In a separate bowl, combine the butter, sourdough starter, vanilla, whole milk, and two eggs. Whisk until combined.
  • Gently fold the wet ingredients into the dry ingredients until everything is just combined. Do not over-mix. The batter should be thick, and it’s okay if there are clumps.
  • Spoon the batter into the muffin tins.
  • Bake for about 30 minutes total. Rotate the pan halfway through.
  • Allow to cool completely.
  • Optional—add icing: Add the milk 1 teaspoon at a time to the powdered sugar, keeping the icing super thick but able to be drizzled.

Did you make this recipe?

Please leave a 5-star review below if you loved it! Tag @cultured.guru on Instagram

 

Nutrition information is auto-calculated and estimated as close as possible. We are not responsible for any errors. We have tested the recipe for accuracy, but your results may vary.

author avatar
Kaitlynn Fenley Author, Educator, Food Microbiologist
Kaitlynn is a food microbiologist and fermentation expert teaching people how to ferment foods and drinks at home.
See Full Bio
fermentation food microbiology sourdough sauerkraut fermenting at home fermented foods fermented drinks
social network icon social network icon social network icon social network icon

welcome!

hey i’m kaitlynn, i’m a microbiologist and together with my husband jon we are cultured guru.

more about us

let’s connect!

newest recipe

Fermented Brussels Sprouts with Garlic and Toasted Pepper
Fermented Pickles

Fermented Brussels Sprouts with Garlic and Toasted Pepper

never miss a thing

learn more about microbes from a microbiologist
Loading

on pinterest

Instant Pot Vegan Chicken Noodle Soup
Sourdough Smores Cookies
High Protein Cottage Cheese Mac and Cheese
Sourdough & Miso Chicolate Chip Cookies
Sourdough Dinner Rolls
Homemade Cottage Cheese

top rated recipes

How to Make Moroccan Preserved Lemons with Sea Salt
Fruits & Roots

How to Make Moroccan Preserved Lemons with Sea Salt

Slow Cooked Pork Roast with Sauerkraut Potatoes and Carrots
Protein

Slow Cooked Pork Roast with Sauerkraut Potatoes and Carrots

Sparkling Golden Beet Kvass Made the Traditional Way
Beverage Fermentation

Sparkling Golden Beet Kvass Made the Traditional Way

learn more

Understand microbes and master fermentation with our online courses!

learn

rate and review
We would love to hear what you think!
Cancel reply

Your email address will not be published. Required fields are marked *

Recipe rating 5 Stars 4 Stars 3 Stars 2 Stars 1 Star

  1. Audrey
    01|18|2024

    These are the best muffins! Made them and was blown away by texture and flavor! (Didn’t have potato starch so simply omitted)

    Reply
    1. Kaitlynn Fenley
      01|22|2024

      Thank you for leaving a review! I’m glad they turned out great without the starch too.

      Reply

you may also like

Family Favorites
Sourdough Discard Muffins View Recipe

The Best Sourdough Discard Muffins for Back-to-School

Sourdough Discard Muffins View Recipe

Orange Cardamom Muffins with Sourdough Discard

Quick & Easy
Sourdough Discard Muffins View Recipe

How to Bake Sourdough Discard Banana Nut Muffins

join us on insta

@cultured.guru

Yes, they smell like farts. YES you should still m Yes, they smell like farts. YES you should still make them, because the fart smell is a really good indicator that the microbes are making the beneficial compounds in the Brussels sprouts more bioavailable. ✨🫧

Get the recipe on my website https://cultured.guru
is this rage bait? 🤠 #kombucha is this rage bait? 🤠

#kombucha
I decided to try using my sourdough discard with t I decided to try using my sourdough discard with this packaged brownie mix and left over s’mores stuff from our latest camping trip!

Sourdough starter makes brownies a little more cake-like, so I had to up the fats in the recipe a bit to keep them moist and used a combo of brown butter and oil. 

Get the recipe for these moist cakey sourdough s’mores brownies on my website, and let me know if you try it!

My recipe index is linked in my bio. https://cultured.guru/blog/brown-butter-sourdough-smores-brownies-from-box-mix
Fermented garlic honey, and I make mine as an oxym Fermented garlic honey, and I make mine as an oxymel 

🍯✨🫧🧄 the recipe is on my website!
https://cultured.guru

Many historical texts mention the use of both garlic and honey in traditional medicine. Still, none explicitly describe the modern method of combining only these two ingredients and leaving them to ferment. In all my readings on fermentation history, I’ve never come across any historical descriptions of fermented garlic honey, made with only garlic and honey.

However, I did come across many accounts of over 1,200 types of oxymel in Ancient Greece and Persia, many of which include garlic.The ancient Greeks and Persians used oxymels to extract and preserve potent herbs, including garlic. Oxymel is an ancient preparation, and Hippocrates wrote records about its benefits around 400 B.C.E. in On Regimen in Acute Diseases.

The thing to note here is that oxymel uses a combination of honey and raw vinegar.

When we make fermented garlic honey as an oxymel, the pH starts at a safe acidity and remains at a safe acidity (below 4.6). This is because the microbes in raw vinegar (or raw kombucha) ensure the honey is metabolized into more acids. These microbes “eat” sugars similarly to the way they do when making kombucha, wild mead, and vinegar. When we add raw vinegar or raw kombucha to a garlic honey oxymel, we are guaranteeing the presence of many acid-producing microbes that keep the mixture acidic and safe.

PSA: I’m not saying that your garlic honey made without raw vinegar is destined to have botulism. But I am saying without raw vinegar/kombucha it is a concern, and it can happen. I am saying that I’m not comfortable making it without raw vinegar/kombucha. 

I have compiled all my thoughts on garlic honey and botulism in the blog post, linked in my bio! You can also type “cultured.guru” right into your web browser and the recipe blog is on my homepage. 

#garlic #honey
Oxymel is a medicinal herbal elixir, made through Oxymel is a medicinal herbal elixir, made through the fermentation of herbs in honey and raw vinegar. 

It’s my favorite time-tested herbal remedy that’s over 2,400 years old. It originated in ancient Greece and Persia, where it was considered a gift from the gods.

Hippocrates, the famous ancient Greek physician, was a staunch advocate of oxymel and incorporated it into his medical practices. Depending on the herbs used to make it, oxymel can help with many ailments and improve health in various ways!

In a world where everyone is asking AI, I set out to learn about the best herbal combinations from real, practiced experts in herbalism.

I felt so much joy collaborating with these herbalists @openspace.center @karlytheherbalist @lilianaruizhealy and @the.brettivy to recommend the best medicinal herb combinations in this recipe!

You can get my oxymel recipe from the link in my bio!
Okay, fine, it’s not the only reason, but it’s a r Okay, fine, it’s not the only reason, but it’s a reaallllyy good reason to buy another pumpkin!

My new sourdough pumpkin bagel recipe is up on our blog!
https://cultured.guru

these roasted pumpkin bagels can be made savory or sweet! Both options are included in the recipe and are perfect for fall sourdough baking. 

The savory is a pumpkin, parmesan, onion (leek) flavor, and the sweet is a cinnamon brown sugar pumpkin flavor! ✨

You can also choose to use active starter or discard with yeast. It’s up to you! 

Let me know if you try baking these this weekend! 🍂🎃🥯
#bagels #pumpkin
Flower Icon
LEARN ABOUT MICROBES FROM A MICROBIOLoGIST
Loading

recipes

  • Sourdough
  • Sauerkraut
  • Yogurt & Kefir
  • Pickles
  • Sweets & Snacks

more

  • Start Here
  • About
  • Learn
  • Shop
  • Contact

social

  • TikTokVisit Cultured Guru TikTok Account
  • InstagramCultured Guru Instagram Account
  • PinterestVisit Cultured Guru’s Pinterest Account
  • FacebookVisit Cultured Guru’s Facebook page
  • Privacy & Terms
Footer Logo
Footer tagline
copyright

©2025

Cultured Guru

.

website by saevil row + MTT. all rights reserved.