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Yogurt & Cheese

How to Make Cottage Cheese Fermented with Probiotic Cultures

Learn how to make Cottage Cheese with live, active cultures. This homemade cottage cheese is made with only milk, cultures, rennet, cream and salt. 

Prep: 20 minutes
Cook: 1 hour
Total: 5 hours 20 minutes
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Recipe Index | Ferment | Yogurt & Cheese

How to Make Cottage Cheese Fermented with Probiotic Cultures

Learn how to make Cottage Cheese with live, active cultures. This homemade cottage cheese is made with only milk, cultures, rennet, cream and salt. 

My Homemade Cottage Cheese Recipe

Let’s talk about the ingredients you need when you’re learning how to make cottage cheese at home:

  • Milk: You can use store-bought milk or farm-fresh milk. If using store-bought, use 2% or whole milk that is low-temp pasteurized, and non-homogenized. While it is possible to use homogenized milk I do not recommend it. I use Kalona Supernatural brand milk.
  • Rennet: I only use animal rennet, but any rennet will do. I think liquid rennet works best. Click here for the one I use.
  • Cultures: Click here for the starter cultures I use. These cultures are the best, and I also use them to make Feta. You need to start with the best cultures possible to make great cottage cheese.
  • Cream: When using non-homogenized milk, scoop 1/2 a cup of cream off the top and set it aside in the fridge for the end of the recipe. Otherwise, you can use whipping cream (make sure the only ingredient is cream; again, I like Kalona Supernatural brand).
  • Salt: Any sea salt will do. You can also use cheese salt.
one of the steps in how to make cottage cheese. The curds are straining through a colander lined with butter muslin.

Is Cottage Cheese Fermented?

Most store-bought cottage cheeses are made by curdling milk with an acid, like vinegar, instead of relying on bacterial cultures to ferment the milk and produce acid. These cottage cheeses are not considered fermented foods and often contain added thickeners. 

How is Traditional Cottage Cheese Made?

In some stores, you can find cottage cheese made traditionally with probiotic cultures. Cottage cheese made with probiotic cultures involves bacterial fermentation, is easier to digest, and is more beneficial for gut health. 

Before the process was industrialized, cottage cheese was always homemade via culturing.

How to Make Cottage Cheese with Probiotic Cultures

Fresh milk from a local, trusted farm in your area is always the best to use in fermentation. I know that can sometimes be hard to get a hold of, so rest assured that store-bought milk works great. Make sure it’s high quality, organic, and from grass-fed animals.

Here is a couple of milk brands I can easily find in my area (Louisiana) that I love to use:

  • Kalona SuperNatural
  • Feliciana Creamery

When making cottage cheese with probiotic cultures, you can use a fresh packet of starter cultures or you can use some homemade cottage cheese that’s still fresh from your last batch.

How to Make Cottage Cheese From Scratch

As with all fermentation, when you learn how to make cottage cheese, know that it involves some waiting around. There are three main steps to making fermented cottage cheese from scratch (you still need to follow the full recipe below; this is just a summarized version of the main steps):

  1. Culturing: First, you will heat the milk to 86° F (30° C), turn off the heat, and sprinkle 1 packet of mesophilic cheese cultures over the top of the milk, then gently stir the cultures into the milk for 1 minute. Place a lid on the pot then wrap the pot in a warm towel or blanket to maintain a warm temperature. Let the pot sit undisturbed for 3 hours.
  2. Curd Formation: After 3 hours, dilute 1/2 teaspoon liquid rennet in 2 tablespoons of filtered water. Add the diluted rennet to the milk mixture and stir with a very gentle up-and-down motion for no more than 30 seconds. Place the lid back on the pot and wrap it in a warm towel or blanket to maintain its temperature. Let the pot sit undisturbed for 1 hour, then check for a clean break.
  3. Cutting and Heating: Cut the curd using four sets of cuts: up and down, side to side, and diagonally. Gently and slowly stir the curds through for five minutes, then rest for 20 minutes. Then repeat once more (stir gently for 5 minutes, rest for 20 minutes). Warm the curds gently over the lowest possible heat to 115° F. Then strain and mix with cream and salt.

How Much Cottage Cheese Does a Gallon of Milk Make?

How much cottage cheese you get from a gallon of milk depends on the milk you use.

If you use whole milk, you will get a little over a quart of homemade cottage cheese. If you use 2% reduced-fat milk, you will get a little under one quart of cottage cheese.

homemade cottage cheese in a glass container with an air-tight lid.

How Long Does Homemade Cottage Cheese Last?

Homemade cottage cheese made with probiotic cultures, rennet, and high-quality milk can typically last for 30-40 days in the refrigerator, provided it is stored properly in a clean, airtight container.

Also, how long it lasts depends on how sanitary you are. Ensure you use clean utensils when serving, and do not double dip. 

To ensure freshness and safety, store it in the coldest part of the fridge, usually near the back, and avoid leaving it out at room temperature for extended periods. Before consuming, check for any signs of spoilage, such as changes in texture, smell, or taste.

How to Make Cottage Cheese Tips

  • Use the highest quality milk.
  • Make sure your rennet is not expired.
  • Make sure your starter cultures are fresh and not expired.
  • Sterilize your butter muslin with vinegar and boiling water before using.
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How to Make Cottage Cheese Fermented with Probiotic Cultures

Learn how to make Cottage Cheese that is thick and creamy, with live and active cultures. This healthy, high-protein cottage cheese has no thickeners, carrageenan, or artificial ingredients. It’s made with only organic milk, probiotic cultures, rennet, cream, and salt.

  • Prep: 20 minutes
  • Cook: 1 hour
  • Total Time: 5 hours 20 minutes

Ingredients

  • 1 gallon milk (non-homogenized, see notes)
  • 1 packet mesophilic starter culture
  • 1/2 tsp liquid rennet
  • 1/2 cup cream (see notes)
  • 1/2 teaspoon salt

Instructions

  1. when using non-homogenized milk, scoop 1/2 cup of cream from the top of the milk and set aside.
  2. You will see a lot of gently stir directions in this recipe, that means stir slowly and avoid making bubbles.
  3. Heat one gallon of milk over low heat to 86° F (30° C).
  4. When the milk reaches 86° F (30° C) turn off the heat and sprinkle 1 packet of cheese cultures over the top of the milk, then gently stir the cultures into the milk for 1 minute.
  5. Place a lid on the pot then wrap the pot in a warm towel or blanket to maintain a warm temperature. Let the pot sit undisturbed for 3 hours.
  6. After 3 hours, dilute 1/2 teaspoon liquid rennet in 2 tablespoons of filtered water.
  7. Add the diluted rennet to the milk mixture and stir with a very gentle up and down motion for no more than 30 seconds.
  8. Place the lid back on the pot and then wrap the pot in a warm towel or blanket to maintain a warm temperature.
  9. Let the pot sit undisturbed for 1 hour.
  10. After 1 hour, check for a clean break: slice the curd once and pull it back a little with the knife. You should see whey fill the crack and your knife should be clean. If you do not have a clean break yet, let it sit for another hour or two then check again.
  11. Cut the curd using four sets of cuts: up and down, side to side and diagonally.
  12. Gently and slowly, stir the curds all the way through for five minutes, then rest for 20 minutes. Then repeat once more (stir gently for 5 minutes, rest for 20 minutes).
  13. Warm the curds to 115° F, gently over the lowest possible heat, stirring continuously but gently. Stirring keeps the curds separated and allows the curds to heat evenly. Be careful to only increase the temperature of the curd about 3° every 5 minutes. It may be necessary to turn the heat off then back on during the process.
  14. When the curds reach 115°F, hold the heat at 115°F for 10 minutes. Continue to stir the curd during this time to ensure even heating.
  15. The curds should be about the size of dried beans and should be slightly firm but somewhat soft.
  16. Strain the curds through a colander lined with clean butter muslin and allow the whey to drain off completely.
  17. In a clean container with an airtight lid, combine the curds with the salt and cream.
  18. Store in the refrigerator for up to 30 days.

Notes

  • Milk: You can use store-bought milk or farm-fresh milk. If using store-bought, use 2% or whole milk that is low-temp pasteurized, and non-homogenized. While it is possible to use homogenized milk I do not recommend it. I use Kalona Supernatural brand milk.
  • Cream: When using non-homogenized milk, scoop 1/2 a cup of cream off the top and set it aside in the fridge for the end of the recipe. Otherwise, you can use whipping cream (make sure the only ingredient is cream; again, I like Kalona Supernatural brand).
  • Rennet: I only use animal rennet, but any rennet will do. I think liquid rennet works best. This is the one I love (click here).
  • When making cottage cheese with probiotic cultures, you can use a fresh packet of starter cultures or you can use some homemade cottage cheese that’s still fresh from your last batch.

Did you make this recipe?

Please leave a 5-star review below if you loved it! Tag @cultured.guru on Instagram

 

Nutrition information is auto-calculated and estimated as close as possible. We are not responsible for any errors. We have tested the recipe for accuracy, but your results may vary.

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Kaitlynn Fenley Author, Educator, Food Microbiologist
Kaitlynn is a food microbiologist and fermentation expert teaching people how to ferment foods and drinks at home.
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  1. Lesli Fenner
    05|02|2024

    Raw goat milk. Will it work well?

    Reply
    1. Kaitlynn Fenley
      05|03|2024

      I haven’t tested the recipe with raw goat milk, so I do not know for sure. It should work in theory. Let me know if you try it!

      Reply
  2. Alexis
    05|03|2024

    Hi Kaitlynn! Thanks for creating this recipe for us! Two questions: can we use the yogurt strainer to separate the whey, and when you say “warm towel” is that something that needs to be fresh out of the dryer and checked to maintain warmth or just bundle the pot? Thanks!!!

    Reply
    1. Kaitlynn Fenley
      05|04|2024

      you can use the yogurt strainer! It just needs to be a fluffy towel or something like a fleece blanket that can insulate the pot a bit to keep the warmth in.

      Reply
    2. Lesli Fenner
      05|15|2024

      It was spectacular with raw goat milk. So creamy and delicious! My goat milk was 2 days old for anyone else trying it

      Reply
      1. Kaitlynn Fenley
        05|15|2024

        Awesome! I’m glad it was great with raw goat milk. I hope I can get some soon to try it too.

        Reply
  3. Lesli Fenner
    05|15|2024

    Truly superb 🤌🏼 and easy to follow instructions!

    Reply
  4. Tori
    05|19|2024

    How much cottage cheese starter would you use in order to substitute the starter packet?

    Reply
    1. Kaitlynn Fenley
      05|21|2024

      it needs to have live active cultures, and about 2 tablespoons will do.

      Reply
  5. Mollie
    05|20|2024

    Hi Kaitlynn! Can I use homemade yogurt as the starter cultures? And if so, how much?

    Or I also have the Good brand organic whole milk cottage cheese. Can I use that?

    Reply
    1. Kaitlynn Fenley
      05|21|2024

      I haven’t tried it, but yogurt could work. Maybe try two tablespoons.

      Reply
  6. Debbie Gerace
    11|14|2024

    Can I freeze fresh made cottage cheese for later use as starter?

    Reply
    1. Kaitlynn Fenley
      11|19|2024

      Possibly! I haven’t tested it so I don’t know for sure.

      Reply
  7. Hannah
    12|05|2024

    I used raw sheep milk and the end result was dry and rubbery. Tastes good but not the right texture. Any tips on where I might’ve gone wrong?

    Reply
    1. Kaitlynn Fenley
      12|05|2024

      rubbery texture means you heated the milk too much too fast, or you used too much rennet

      Reply
  8. Olivia
    01|09|2025

    Hey Kaitlynn! I have liquid animal rennet from fermentaholics because I couldn’t get your recommended brand in Canada. On the back of the bottle it says 1/4 tsp per gallon of milk. Should I follow the recipe with 1/2 tsp or go with 1/4 tsp? I don’t want to mess it up because raw milk is expensive haha. 😆 thank you!

    Reply
    1. Kaitlynn Fenley
      01|09|2025

      Hmmm… good question! I want to say stick to the recipe, but their rennet may be more concentrated than the one I used. Maybe meet in the middle and do 1/4 tsp + 1/8 tsp? Let me know how it turns out!

      Reply
      1. Olivia
        01|09|2025

        Thanks so much for your reply! I did exactly that with the rennet, 1/4 tsp + 1/8 tsp. The curds are a bit rubbery but I heated them very slowly so I think next time I’ll cut it down to just 1/4 tsp but I wanted to be sure the curds would actually set so I’m glad I did more today. Overall I’m very pleased as this was my first time making cheese ever! As a Canadian it’s impossible to find cultured cottage cheese anywhere in stores here so I decided I needed to learn how to make it myself. I appreciate your recipes and your reply!!

        Reply
  9. Mic
    02|09|2025

    Hi, excited to try your recipe! I was wondering though, I thought anything above 80° would kill the live cultures? Can you help me understand

    Reply
    1. Kaitlynn Fenley
      02|10|2025

      No, the cultures thrive perfectly well at the temperatures listed in the recipe!

      Reply
  10. Kathy
    03|02|2025

    Hi there. I know you said that you don’t recommend using homogenized milk but that’s all I could find in my part of the state. I’m at the 3 and a half hour more as I write this and still no curd at all. I’ll follow your instructions and see what happens after another hour or so and see what happens but I’m wondering if I’m not getting results because of the homogenized milk?

    Reply
    1. Kaitlynn Fenley
      03|05|2025

      yeah, I never get good results with homogenized milk.

      Reply
    2. Allison
      07|22|2025

      Add a quarter teaspoon of calcium chloride (dilute it in a tablespoon or so of water) to help with the curd separation process in homogenized milk!

      Reply
      1. Kaitlynn Fenley
        07|23|2025

        good tip! I’ll have to try this!

        Reply
  11. Rhonda
    07|07|2025

    Kaitlynn,
    Thanks for this. I am very excited to try it. My question is if you have used an instant pot on “yogurt” mode to keep warm when needed? …if not, do you think that would work well? Thanks, Rhonda

    Reply
    1. Kaitlynn Fenley
      07|07|2025

      yes! I think that will work great for holding the temp!

      Reply

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And the knife stays in the box. GOOGLE “sourdoug And the knife stays in the box. 

GOOGLE “sourdough king cake” my recipe is the first one! 👑☂️💚✨

If you’re like me and prefer from scratch, homemade everything, you’ll definitely want to try this king cake for Mardi Gras! I used organic naturally dyed sprinkles and all that jazz too. 

If you just search “sourdough king cake” on google you’ll see my recipe, it’s usually the first one. 

My main tips for making this:
✨use a very active starter or throw in some instant yeast with your starter
✨make sure the dough is actually proofed before shaping it. If it’s cold in your house it will take longer. 
✨please follow directions! You can cold ferment the dough in the fridge after it doubles in size and BEFORE filling and shaping.

🎵Song is Casanova by Rebirth Brass Band
Fermentation is a gift from the microbes of this e Fermentation is a gift from the microbes of this earth.

When we had a food business, I could never shake the feeling that fermentation is not meant to be sold to you from a fluorescently lit grocery shelf in an endless cycle of waste. Fermentation is meant to be cultivated in your home, with your hands, with intention and love in a sustainable, grateful practice of reciprocity and nourishment. 

This is the story of how we got here. 

After so many lessons learned, our small fermentation business is now value aligned, peaceful, fulfilling, and happy.  It often seems like the gut feelings (the microbes within us) guided us in the right direction. To teach. 

You can learn for free on our blog, or you can enroll in our online courses (we extended our new year sale!) Either way, with me as your teacher, you’ll learn to adopt a holistic perspective on the microbial ecosystems that influence our food, lives, and the planet.
My favorite topic I teach in our online course is My favorite topic I teach in our online course is called Fermentation Variables. The whole lesson is centered around the fact that there are six main variables that influence the outcome of fermentation.

Here they are, in no particular order:

Sugar
Salt
Oxygen
Acidity
Temperature
Time

Temperature and time depend on each other most closely. 

that means, for all of our foods and drinks that ferment at room temp, things slow way down in the winter cold. 

The fermentation timeline is simply longer when it’s colder (and faster when it’s hotter). The microbes, kind of like us, make things happen slowly in the cold winter. 

I think this is yet another sign from nature that we’re supposed to rest and be gentle and gracious with deadlines, work, and not rush things this time of year. 

Let it be slow, it’ll still be great, it just takes a little more patience and time. 

If you’re looking to start fermentation as an analog hobby in the new year, our courses are 40% off right now! You can use code NEWYEARS at checkout. (Yes, you learn online, but it’s delicious, long form content + the skills are life long). What you learn empowers you to get off the computer/phone and go ferment some delicious foods and drinks. 

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Yes cooking kills the microbes, but idc. I mean, I Yes cooking kills the microbes, but idc. I mean, I care, but in a “thank you for your service microbes” kinda way. 🫡

Cider braised pork and sauerkraut is a perfect choice for New Year’s or any winter meal! I lovvveee pairing it with butternut squash polenta bc it’s full of vitamin C for cold and flu szn. 

Eating pork and sauerkraut on New Year’s Day is a tradition. And I really do think it brings good luck and prosperity.

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One Christmas I gifted everyone in my family the N One Christmas I gifted everyone in my family the New York style sourdough bagels and they were thrilled. (The bagels we’re actually way under proofed, but I still gifted them and everyone loved them lol)

You can get the full recipe on my blog! And these can be made with discard and instant yeast or with just active starter.

 All the details are in the 5-star rated recipe on my website. 

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This cookie dough is long-fermented overnight in t This cookie dough is long-fermented overnight in the fridge for the softest, most flavorful, melt-in your mouth sourdough gingerbread cookies.

For Christmas 2025, I tried something new with these cookies. I created a gingerbread sourdough starter to use in this recipe! I made it by feeding some of my established starter a mix that includes molasses and gingerbread spices. I just added the instructions for the gingerbread starter in the notes of my cookie recipe.

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